R/scater_logNormCounts.R
scaterlogNormCounts.Rd
scaterlogNormCounts Uses logNormCounts to log normalize input data
scaterlogNormCounts(
inSCE,
assayName = "ScaterLogNormCounts",
useAssay = "counts"
)
Input SingleCellExperiment object
New assay name for log normalized data
Input assay
inSCE Updated SingleCellExperiment object that contains the new log normalized data
data(sce_chcl, package = "scds")
sce_chcl <- scaterlogNormCounts(sce_chcl,"logcounts", "counts")