scaterCPM Uses CPM from scater library to compute counts-per-million.

scaterCPM Uses CPM from scater library to compute counts-per-million.

scaterCPM(inSCE, assayName = "ScaterCPMCounts", useAssay = "counts")

Arguments

inSCE

Input SingleCellExperiment object

assayName

New assay name for cpm data.

useAssay

Input assay

Value

inSCE Updated SingleCellExperiment object

Author

Irzam Sarfraz

Examples

data(sce_chcl, package = "scds")
sce_chcl <- scaterCPM(sce_chcl,"countsCPM", "counts")