Return sample from musica_variant object

subset_variants_by_samples(musica, sample_name)

Arguments

musica	A `musica` object.
sample_name	Sample name to subset by

Value

Returns sample data.frame subset to a single sample

Examples

data(musica)
subset_variants_by_samples(musica, "TCGA-94-7557-01A-11D-2122-08")
#>        chr     start       end ref alt                       sample
#>   1:  chr1  11020563  11020563   C   A TCGA-94-7557-01A-11D-2122-08
#>   2:  chr1  43430030  43430030   G   T TCGA-94-7557-01A-11D-2122-08
#>   3:  chr1  58682403  58682403   A   G TCGA-94-7557-01A-11D-2122-08
#>   4:  chr1 109508295 109508295   C   G TCGA-94-7557-01A-11D-2122-08
#>   5:  chr1 156384826 156384826   A   C TCGA-94-7557-01A-11D-2122-08
#>  ---                                                               
#> 116: chr19  54255365  54255365   G   A TCGA-94-7557-01A-11D-2122-08
#> 117: chr20  49028576  49028576   C   T TCGA-94-7557-01A-11D-2122-08
#> 118: chr21  25881519  25881519   C   G TCGA-94-7557-01A-11D-2122-08
#> 119:  chrX  12886189  12886189   A   G TCGA-94-7557-01A-11D-2122-08
#> 120:  chrX 153950810 153950810   C   T TCGA-94-7557-01A-11D-2122-08
#>      Variant_Type
#>   1:          SBS
#>   2:          SBS
#>   3:          SBS
#>   4:          SBS
#>   5:          SBS
#>  ---             
#> 116:          SBS
#> 117:          SBS
#> 118:          SBS
#> 119:          SBS
#> 120:          SBS