sceCeldaC

A SingleCellExperiment object containing the results of running selectFeatures and celda_C on celdaCSim.

sceCeldaC

Format

A SingleCellExperiment object

Examples

data(celdaCSim)
sceCeldaC <- selectFeatures(celdaCSim$counts)
sceCeldaC <- celda_C(sceCeldaC,
    K = celdaCSim$K,
    sampleLabel = celdaCSim$sampleLabel,
    nchains = 1)
#> --------------------------------------------------
#> Starting Celda_C: Clustering cells.
#> --------------------------------------------------
#> Mon Jul 19 11:01:16 2021 .. Initializing 'z' in chain 1 with 'split' 
#> Mon Jul 19 11:01:16 2021 .... Completed iteration: 1 | logLik: -1282027.27277705
#> Mon Jul 19 11:01:16 2021 .... Completed iteration: 2 | logLik: -1282027.27277705
#> Mon Jul 19 11:01:16 2021 .. Finished chain 1
#> --------------------------------------------------
#> Completed Celda_C. Total time: 0.054178 secs
#> --------------------------------------------------